Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm11539-201ENSMUST00000119837 557 ntBASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm27463-201ENSMUST00000183569 57 ntBASIC14.1□□□□□ -0.15
Sf3b6P59708 Mir7071-201ENSMUST00000184847 69 ntBASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.1□□□□□ -0.15
Sf3b6P59708 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sf3b6P59708 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Sf3b6P59708 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sf3b6P59708 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sf3b6P59708 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.09□□□□□ -0.15
Sf3b6P59708 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sf3b6P59708 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b6P59708 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Sf3b6P59708 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b6P59708 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b6P59708 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b6P59708 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b6P59708 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b6P59708 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b6P59708 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Sf3b6P59708 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sf3b6P59708 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sf3b6P59708 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sf3b6P59708 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.08□□□□□ -0.16
Sf3b6P59708 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b6P59708 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b6P59708 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3b6P59708 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b6P59708 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms