Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cldn18P56857 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cldn18P56857 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn18P56857 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn18P56857 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Cldn18P56857 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cldn18P56857 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Gm7153-201ENSMUST00000117092 455 ntBASIC14.19□□□□□ -0.14
Cldn18P56857 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.19□□□□□ -0.14
Cldn18P56857 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.19□□□□□ -0.14
Cldn18P56857 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cldn18P56857 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn18P56857 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn18P56857 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.18□□□□□ -0.14
Cldn18P56857 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cldn18P56857 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn18P56857 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn18P56857 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn18P56857 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn18P56857 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn18P56857 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cldn18P56857 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn18P56857 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn18P56857 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.17□□□□□ -0.14
Cldn18P56857 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.17□□□□□ -0.14
Cldn18P56857 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.17□□□□□ -0.14
Cldn18P56857 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn18P56857 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn18P56857 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn18P56857 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn18P56857 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cldn18P56857 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cldn18P56857 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Cldn18P56857 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms