Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Gm15358-201ENSMUST00000119249 520 ntBASIC20■□□□□ 0.79
Msh6P54276 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20■□□□□ 0.79
Msh6P54276 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Msh6P54276 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh6P54276 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Msh6P54276 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.99■□□□□ 0.79
Msh6P54276 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.99■□□□□ 0.79
Msh6P54276 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Msh6P54276 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.99■□□□□ 0.79
Msh6P54276 Mir6956-201ENSMUST00000183598 62 ntBASIC19.99■□□□□ 0.79
Msh6P54276 Gm27494-201ENSMUST00000184735 189 ntBASIC19.99■□□□□ 0.79
Msh6P54276 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Msh6P54276 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Msh6P54276 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Msh6P54276 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Msh6P54276 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Msh6P54276 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Msh6P54276 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh6P54276 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.98■□□□□ 0.79
Msh6P54276 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.98■□□□□ 0.79
Msh6P54276 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh6P54276 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Msh6P54276 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Msh6P54276 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Msh6P54276 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.97■□□□□ 0.79
Msh6P54276 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Msh6P54276 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Mir1895-201ENSMUST00000122615 79 ntBASIC19.97■□□□□ 0.79
Msh6P54276 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.97■□□□□ 0.79
Msh6P54276 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.97■□□□□ 0.79
Msh6P54276 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.97■□□□□ 0.79
Msh6P54276 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.97■□□□□ 0.79
Msh6P54276 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.97■□□□□ 0.79
Msh6P54276 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Msh6P54276 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Msh6P54276 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh6P54276 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.97■□□□□ 0.79
Msh6P54276 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms