Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.68■□□□□ 0.42
Brca1P48754 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.68■□□□□ 0.42
Brca1P48754 Gm12151-201ENSMUST00000121374 290 ntBASIC17.68■□□□□ 0.42
Brca1P48754 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.68■□□□□ 0.42
Brca1P48754 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.68■□□□□ 0.42
Brca1P48754 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Gm38294-201ENSMUST00000192831 381 ntBASIC17.68■□□□□ 0.42
Brca1P48754 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.68■□□□□ 0.42
Brca1P48754 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.68■□□□□ 0.42
Brca1P48754 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.68■□□□□ 0.42
Brca1P48754 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.67■□□□□ 0.42
Brca1P48754 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.67■□□□□ 0.42
Brca1P48754 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Brca1P48754 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Brca1P48754 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.67■□□□□ 0.42
Brca1P48754 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Brca1P48754 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Brca1P48754 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.66■□□□□ 0.42
Brca1P48754 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.66■□□□□ 0.42
Brca1P48754 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Brca1P48754 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Brca1P48754 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Brca1P48754 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Brca1P48754 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Brca1P48754 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.66■□□□□ 0.42
Brca1P48754 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Brca1P48754 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Brca1P48754 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Brca1P48754 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.65■□□□□ 0.42
Brca1P48754 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.65■□□□□ 0.42
Brca1P48754 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Brca1P48754 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.65■□□□□ 0.42
Brca1P48754 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Brca1P48754 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Brca1P48754 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.65■□□□□ 0.42
Brca1P48754 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Brca1P48754 Mir7684-201ENSMUST00000183858 60 ntBASIC17.65■□□□□ 0.42
Brca1P48754 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Brca1P48754 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Brca1P48754 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Brca1P48754 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Brca1P48754 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Brca1P48754 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Brca1P48754 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.64■□□□□ 0.41
Brca1P48754 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.64■□□□□ 0.41
Brca1P48754 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Brca1P48754 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.64■□□□□ 0.41
Brca1P48754 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Brca1P48754 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Brca1P48754 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms