Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfx3P48381 Gm11355-201ENSMUST00000121120 306 ntBASIC14.36□□□□□ -0.11
Rfx3P48381 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rfx3P48381 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Gm9987-201ENSMUST00000069768 567 ntBASIC14.36□□□□□ -0.11
Rfx3P48381 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfx3P48381 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.36□□□□□ -0.11
Rfx3P48381 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfx3P48381 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rfx3P48381 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfx3P48381 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfx3P48381 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rfx3P48381 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfx3P48381 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.35□□□□□ -0.11
Rfx3P48381 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rfx3P48381 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx3P48381 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.34□□□□□ -0.11
Rfx3P48381 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.34□□□□□ -0.11
Rfx3P48381 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfx3P48381 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.34□□□□□ -0.11
Rfx3P48381 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfx3P48381 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfx3P48381 Gm37722-201ENSMUST00000193757 208 ntBASIC14.34□□□□□ -0.11
Rfx3P48381 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.34□□□□□ -0.11
Rfx3P48381 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfx3P48381 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx3P48381 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx3P48381 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.33□□□□□ -0.12
Rfx3P48381 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rfx3P48381 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfx3P48381 Gm36967-201ENSMUST00000193814 266 ntBASIC14.33□□□□□ -0.12
Rfx3P48381 Gm18032-201ENSMUST00000222541 538 ntBASIC14.33□□□□□ -0.12
Rfx3P48381 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfx3P48381 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfx3P48381 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfx3P48381 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms