Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Xcl1P47993 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC10.37□□□□□ -0.75
Xcl1P47993 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Xcl1P47993 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Xcl1P47993 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC10.37□□□□□ -0.75
Xcl1P47993 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC10.37□□□□□ -0.75
Xcl1P47993 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Xcl1P47993 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC10.36□□□□□ -0.75
Xcl1P47993 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Xcl1P47993 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Gm7160-202ENSMUST00000188519 1027 ntBASIC10.36□□□□□ -0.75
Xcl1P47993 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.36□□□□□ -0.75
Xcl1P47993 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Xcl1P47993 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.36□□□□□ -0.75
Xcl1P47993 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Xcl1P47993 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Xcl1P47993 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Xcl1P47993 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Xcl1P47993 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Xcl1P47993 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Xcl1P47993 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Xcl1P47993 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Xcl1P47993 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Xcl1P47993 AC165080.2-201ENSMUST00000217491 1530 ntBASIC10.35□□□□□ -0.75
Xcl1P47993 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Xcl1P47993 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Xcl1P47993 Spcs1-204ENSMUST00000226782 949 ntBASIC10.35□□□□□ -0.75
Xcl1P47993 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 BC037039-201ENSMUST00000192003 2205 ntBASIC10.35□□□□□ -0.75
Xcl1P47993 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Xcl1P47993 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms