Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HttP42859 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HttP42859 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Gm6218-201ENSMUST00000219812 628 ntBASIC16.8■□□□□ 0.28
HttP42859 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HttP42859 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
HttP42859 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HttP42859 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HttP42859 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HttP42859 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.79■□□□□ 0.28
HttP42859 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.79■□□□□ 0.28
HttP42859 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HttP42859 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HttP42859 Gm8410-201ENSMUST00000117225 605 ntBASIC16.79■□□□□ 0.28
HttP42859 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.79■□□□□ 0.28
HttP42859 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.79■□□□□ 0.28
HttP42859 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.79■□□□□ 0.28
HttP42859 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HttP42859 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HttP42859 Gm12859-201ENSMUST00000117834 427 ntBASIC16.78■□□□□ 0.28
HttP42859 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.78■□□□□ 0.28
HttP42859 Gm14767-201ENSMUST00000121559 586 ntBASIC16.78■□□□□ 0.28
HttP42859 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.78■□□□□ 0.28
HttP42859 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.78■□□□□ 0.28
HttP42859 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.78■□□□□ 0.28
HttP42859 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HttP42859 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HttP42859 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.77■□□□□ 0.28
HttP42859 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HttP42859 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HttP42859 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HttP42859 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HttP42859 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HttP42859 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.77■□□□□ 0.27
HttP42859 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HttP42859 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HttP42859 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.76■□□□□ 0.27
HttP42859 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Gm19164-201ENSMUST00000210667 640 ntBASIC16.76■□□□□ 0.27
HttP42859 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HttP42859 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HttP42859 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HttP42859 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HttP42859 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HttP42859 Gm29667-201ENSMUST00000190817 490 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms