Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.31■□□□□ 0.2
Cxcl12P40224 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cxcl12P40224 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.31■□□□□ 0.2
Cxcl12P40224 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.31■□□□□ 0.2
Cxcl12P40224 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.31■□□□□ 0.2
Cxcl12P40224 Gm18246-201ENSMUST00000221023 728 ntBASIC16.31■□□□□ 0.2
Cxcl12P40224 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.31■□□□□ 0.2
Cxcl12P40224 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.31■□□□□ 0.2
Cxcl12P40224 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cxcl12P40224 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.3■□□□□ 0.2
Cxcl12P40224 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.3■□□□□ 0.2
Cxcl12P40224 Gm13823-201ENSMUST00000119930 345 ntBASIC16.3■□□□□ 0.2
Cxcl12P40224 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cxcl12P40224 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cxcl12P40224 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cxcl12P40224 Gm18057-201ENSMUST00000208220 503 ntBASIC16.3■□□□□ 0.2
Cxcl12P40224 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cxcl12P40224 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cxcl12P40224 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.29■□□□□ 0.2
Cxcl12P40224 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.29■□□□□ 0.2
Cxcl12P40224 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cxcl12P40224 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl12P40224 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.28■□□□□ 0.2
Cxcl12P40224 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.28■□□□□ 0.2
Cxcl12P40224 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cxcl12P40224 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl12P40224 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cxcl12P40224 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.27■□□□□ 0.2
Cxcl12P40224 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cxcl12P40224 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.27■□□□□ 0.2
Cxcl12P40224 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.27■□□□□ 0.2
Cxcl12P40224 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.27■□□□□ 0.2
Cxcl12P40224 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.27■□□□□ 0.2
Cxcl12P40224 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cxcl12P40224 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl12P40224 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cxcl12P40224 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.27■□□□□ 0.19
Cxcl12P40224 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl12P40224 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.27■□□□□ 0.19
Cxcl12P40224 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms