Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd1P40201 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd1P40201 Gm15653-201ENSMUST00000119247 907 ntBASIC23.8■■□□□ 1.4
Chd1P40201 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd1P40201 Gm18049-201ENSMUST00000208909 581 ntBASIC23.8■■□□□ 1.4
Chd1P40201 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd1P40201 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Chd1P40201 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd1P40201 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd1P40201 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Chd1P40201 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 AC153962.4-201ENSMUST00000217878 242 ntBASIC23.79■■□□□ 1.4
Chd1P40201 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Chd1P40201 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Chd1P40201 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Chd1P40201 Gm6263-201ENSMUST00000120029 1342 ntBASIC23.79■■□□□ 1.4
Chd1P40201 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Chd1P40201 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC23.79■■□□□ 1.4
Chd1P40201 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC23.79■■□□□ 1.4
Chd1P40201 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Chd1P40201 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC23.79■■□□□ 1.4
Chd1P40201 Gm38225-201ENSMUST00000194001 393 ntBASIC23.79■■□□□ 1.4
Chd1P40201 Gm43703-201ENSMUST00000200523 763 ntBASIC23.79■■□□□ 1.4
Chd1P40201 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Chd1P40201 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC23.79■■□□□ 1.4
Chd1P40201 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd1P40201 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Gm11841-201ENSMUST00000117060 1963 ntBASIC23.78■■□□□ 1.4
Chd1P40201 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Chd1P40201 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC23.78■■□□□ 1.4
Chd1P40201 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC23.78■■□□□ 1.4
Chd1P40201 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC23.78■■□□□ 1.4
Chd1P40201 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Chd1P40201 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Chd1P40201 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd1P40201 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC23.77■■□□□ 1.4
Chd1P40201 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Chd1P40201 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Mir6420-201ENSMUST00000185032 102 ntBASIC23.77■■□□□ 1.4
Chd1P40201 Gm18766-201ENSMUST00000189811 808 ntBASIC23.77■■□□□ 1.4
Chd1P40201 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1P40201 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Chd1P40201 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Chd1P40201 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC23.76■■□□□ 1.39
Chd1P40201 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Chd1P40201 Gm43630-201ENSMUST00000201550 776 ntBASIC23.76■■□□□ 1.39
Chd1P40201 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1P40201 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC23.75■■□□□ 1.39
Chd1P40201 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 Gm11478-201ENSMUST00000117851 599 ntBASIC23.75■■□□□ 1.39
Chd1P40201 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC23.75■■□□□ 1.39
Chd1P40201 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC23.75■■□□□ 1.39
Chd1P40201 Gm15483-201ENSMUST00000120338 456 ntBASIC23.75■■□□□ 1.39
Chd1P40201 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 AC154231.1-201ENSMUST00000220564 2175 ntBASIC23.75■■□□□ 1.39
Chd1P40201 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1P40201 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Chd1P40201 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1P40201 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1P40201 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Chd1P40201 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1P40201 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC23.74■■□□□ 1.39
Chd1P40201 Gm16026-204ENSMUST00000162652 683 ntBASIC23.74■■□□□ 1.39
Chd1P40201 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1P40201 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC23.74■■□□□ 1.39
Chd1P40201 AY702102-202ENSMUST00000194651 1173 ntBASIC23.74■■□□□ 1.39
Chd1P40201 AC160980.1-201ENSMUST00000224136 970 ntBASIC23.74■■□□□ 1.39
Chd1P40201 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1P40201 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms