Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Gm27275-201ENSMUST00000184318 272 ntBASIC12.58□□□□□ -0.4
Rom1P32958 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.58□□□□□ -0.4
Rom1P32958 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rom1P32958 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rom1P32958 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rom1P32958 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rom1P32958 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Rom1P32958 Gm15378-201ENSMUST00000121894 207 ntBASIC12.57□□□□□ -0.4
Rom1P32958 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Gm44450-201ENSMUST00000199528 114 ntBASIC12.57□□□□□ -0.4
Rom1P32958 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Rom1P32958 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rom1P32958 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rom1P32958 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rom1P32958 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.56□□□□□ -0.4
Rom1P32958 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.56□□□□□ -0.4
Rom1P32958 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rom1P32958 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rom1P32958 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.56□□□□□ -0.4
Rom1P32958 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rom1P32958 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rom1P32958 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.56□□□□□ -0.4
Rom1P32958 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.56□□□□□ -0.4
Rom1P32958 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rom1P32958 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rom1P32958 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.55□□□□□ -0.4
Rom1P32958 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.55□□□□□ -0.4
Rom1P32958 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rom1P32958 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Rom1P32958 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms