Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc6a1P31648 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc6a1P31648 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.68□□□□□ -0.22
Slc6a1P31648 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc6a1P31648 Gm13836-201ENSMUST00000121159 501 ntBASIC13.67□□□□□ -0.22
Slc6a1P31648 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.67□□□□□ -0.22
Slc6a1P31648 Gm37292-201ENSMUST00000192062 758 ntBASIC13.67□□□□□ -0.22
Slc6a1P31648 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.67□□□□□ -0.22
Slc6a1P31648 Gm21814-202ENSMUST00000203277 873 ntBASIC13.67□□□□□ -0.22
Slc6a1P31648 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Slc6a1P31648 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc6a1P31648 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Slc6a1P31648 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a1P31648 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Gm42545-201ENSMUST00000202755 922 ntBASIC13.66□□□□□ -0.22
Slc6a1P31648 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.66□□□□□ -0.22
Slc6a1P31648 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc6a1P31648 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.66□□□□□ -0.22
Slc6a1P31648 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a1P31648 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Sybu-209ENSMUST00000228639 4113 ntBASIC13.65□□□□□ -0.22
Slc6a1P31648 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms