Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
VtnP29788 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.35□□□□□ -0.11
VtnP29788 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VtnP29788 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.35□□□□□ -0.11
VtnP29788 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.34□□□□□ -0.11
VtnP29788 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VtnP29788 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.34□□□□□ -0.11
VtnP29788 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
VtnP29788 Gm12644-201ENSMUST00000119935 606 ntBASIC14.34□□□□□ -0.11
VtnP29788 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.34□□□□□ -0.11
VtnP29788 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.34□□□□□ -0.11
VtnP29788 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
VtnP29788 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
VtnP29788 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VtnP29788 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VtnP29788 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VtnP29788 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VtnP29788 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VtnP29788 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VtnP29788 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
VtnP29788 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.33□□□□□ -0.12
VtnP29788 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.33□□□□□ -0.12
VtnP29788 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
VtnP29788 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VtnP29788 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.33□□□□□ -0.12
VtnP29788 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
VtnP29788 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VtnP29788 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
VtnP29788 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VtnP29788 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VtnP29788 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VtnP29788 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.32□□□□□ -0.12
VtnP29788 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.32□□□□□ -0.12
VtnP29788 Gm25745-201ENSMUST00000174945 133 ntBASIC14.32□□□□□ -0.12
VtnP29788 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.32□□□□□ -0.12
VtnP29788 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.32□□□□□ -0.12
VtnP29788 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.32□□□□□ -0.12
VtnP29788 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.32□□□□□ -0.12
VtnP29788 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VtnP29788 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VtnP29788 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.31□□□□□ -0.12
VtnP29788 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VtnP29788 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VtnP29788 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VtnP29788 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VtnP29788 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VtnP29788 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms