Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nedd8P29595 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.74□□□□□ -0.05
Nedd8P29595 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.73□□□□□ -0.05
Nedd8P29595 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.73□□□□□ -0.05
Nedd8P29595 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nedd8P29595 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Nedd8P29595 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nedd8P29595 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nedd8P29595 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.72□□□□□ -0.05
Nedd8P29595 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.72□□□□□ -0.05
Nedd8P29595 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nedd8P29595 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nedd8P29595 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nedd8P29595 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.71□□□□□ -0.05
Nedd8P29595 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Nedd8P29595 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.71□□□□□ -0.05
Nedd8P29595 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Nedd8P29595 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nedd8P29595 Gm37025-201ENSMUST00000195159 829 ntBASIC14.71□□□□□ -0.05
Nedd8P29595 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nedd8P29595 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nedd8P29595 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.71□□□□□ -0.05
Nedd8P29595 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Nedd8P29595 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nedd8P29595 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.71□□□□□ -0.06
Nedd8P29595 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.71□□□□□ -0.06
Nedd8P29595 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.7□□□□□ -0.06
Nedd8P29595 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nedd8P29595 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.7□□□□□ -0.06
Nedd8P29595 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.7□□□□□ -0.06
Nedd8P29595 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.7□□□□□ -0.06
Nedd8P29595 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.7□□□□□ -0.06
Nedd8P29595 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.7□□□□□ -0.06
Nedd8P29595 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Nedd8P29595 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nedd8P29595 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.7□□□□□ -0.06
Nedd8P29595 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nedd8P29595 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nedd8P29595 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms