Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col2a1P28481 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Gm26308-201ENSMUST00000157768 69 ntBASIC17.85■□□□□ 0.45
Col2a1P28481 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col2a1P28481 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.85■□□□□ 0.45
Col2a1P28481 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col2a1P28481 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col2a1P28481 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col2a1P28481 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.84■□□□□ 0.45
Col2a1P28481 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col2a1P28481 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col2a1P28481 Gm16198-201ENSMUST00000118766 670 ntBASIC17.84■□□□□ 0.45
Col2a1P28481 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Rpph1-201ENSMUST00000175096 319 ntBASIC17.84■□□□□ 0.45
Col2a1P28481 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.84■□□□□ 0.45
Col2a1P28481 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.84■□□□□ 0.45
Col2a1P28481 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col2a1P28481 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col2a1P28481 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Col2a1P28481 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.83■□□□□ 0.45
Col2a1P28481 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.83■□□□□ 0.45
Col2a1P28481 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.83■□□□□ 0.45
Col2a1P28481 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col2a1P28481 Gm8396-201ENSMUST00000057361 823 ntBASIC17.83■□□□□ 0.45
Col2a1P28481 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Col2a1P28481 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col2a1P28481 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.83■□□□□ 0.45
Col2a1P28481 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Col2a1P28481 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.83■□□□□ 0.44
Col2a1P28481 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col2a1P28481 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Col2a1P28481 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.82■□□□□ 0.44
Col2a1P28481 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Col2a1P28481 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Gm2272-201ENSMUST00000194903 582 ntBASIC17.82■□□□□ 0.44
Col2a1P28481 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.82■□□□□ 0.44
Col2a1P28481 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col2a1P28481 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.82■□□□□ 0.44
Col2a1P28481 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.82■□□□□ 0.44
Col2a1P28481 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.82■□□□□ 0.44
Col2a1P28481 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col2a1P28481 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.82■□□□□ 0.44
Col2a1P28481 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.82■□□□□ 0.44
Col2a1P28481 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.82■□□□□ 0.44
Col2a1P28481 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.82■□□□□ 0.44
Col2a1P28481 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col2a1P28481 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col2a1P28481 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Col2a1P28481 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.81■□□□□ 0.44
Col2a1P28481 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.81■□□□□ 0.44
Col2a1P28481 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col2a1P28481 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Col2a1P28481 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.81■□□□□ 0.44
Col2a1P28481 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.81■□□□□ 0.44
Col2a1P28481 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.81■□□□□ 0.44
Col2a1P28481 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.81■□□□□ 0.44
Col2a1P28481 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col2a1P28481 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col2a1P28481 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.8■□□□□ 0.44
Col2a1P28481 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col2a1P28481 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms