Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.61□□□□□ -0.07
Cd40lgP27548 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cd40lgP27548 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cd40lgP27548 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cd40lgP27548 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cd40lgP27548 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cd40lgP27548 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cd40lgP27548 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd40lgP27548 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cd40lgP27548 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cd40lgP27548 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cd40lgP27548 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.59□□□□□ -0.07
Cd40lgP27548 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.59□□□□□ -0.07
Cd40lgP27548 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.59□□□□□ -0.07
Cd40lgP27548 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.59□□□□□ -0.07
Cd40lgP27548 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd40lgP27548 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms