Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Col8a2P25318 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col8a2P25318 Gm4535-201ENSMUST00000182274 558 ntBASIC13.23□□□□□ -0.29
Col8a2P25318 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.23□□□□□ -0.29
Col8a2P25318 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col8a2P25318 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Gm10355-201ENSMUST00000097146 517 ntBASIC13.23□□□□□ -0.29
Col8a2P25318 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col8a2P25318 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Col8a2P25318 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.23□□□□□ -0.29
Col8a2P25318 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col8a2P25318 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.22□□□□□ -0.29
Col8a2P25318 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Col8a2P25318 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.22□□□□□ -0.29
Col8a2P25318 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col8a2P25318 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col8a2P25318 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.22□□□□□ -0.29
Col8a2P25318 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm8825-201ENSMUST00000182565 998 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm4518-201ENSMUST00000182638 718 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm10060-201ENSMUST00000212002 111 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col8a2P25318 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col8a2P25318 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.22□□□□□ -0.29
Col8a2P25318 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col8a2P25318 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col8a2P25318 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col8a2P25318 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col8a2P25318 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.21□□□□□ -0.29
Col8a2P25318 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.21□□□□□ -0.29
Col8a2P25318 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col8a2P25318 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.21□□□□□ -0.29
Col8a2P25318 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.21□□□□□ -0.29
Col8a2P25318 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col8a2P25318 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms