Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Gm9013-201ENSMUST00000132939 882 ntBASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Gm44430-201ENSMUST00000203376 995 ntBASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf1aP25118 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Mir770-201ENSMUST00000103252 94 ntBASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf1aP25118 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Gm6623-201ENSMUST00000173570 544 ntBASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf1aP25118 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Gm10231-201ENSMUST00000181584 441 ntBASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Gm10175-202ENSMUST00000208752 441 ntBASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfrsf1aP25118 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms