Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cbx3P23198 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.49□□□□□ -0.09
Cbx3P23198 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.49□□□□□ -0.09
Cbx3P23198 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.49□□□□□ -0.09
Cbx3P23198 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.49□□□□□ -0.09
Cbx3P23198 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Cbx3P23198 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cbx3P23198 Gm26571-201ENSMUST00000181399 666 ntBASIC14.49□□□□□ -0.09
Cbx3P23198 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.49□□□□□ -0.09
Cbx3P23198 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cbx3P23198 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.49□□□□□ -0.09
Cbx3P23198 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cbx3P23198 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cbx3P23198 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cbx3P23198 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cbx3P23198 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.48□□□□□ -0.09
Cbx3P23198 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cbx3P23198 Gm44549-201ENSMUST00000208351 577 ntBASIC14.48□□□□□ -0.09
Cbx3P23198 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.48□□□□□ -0.09
Cbx3P23198 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cbx3P23198 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cbx3P23198 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cbx3P23198 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cbx3P23198 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cbx3P23198 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Gm27405-201ENSMUST00000184201 112 ntBASIC14.47□□□□□ -0.09
Cbx3P23198 Gm38285-201ENSMUST00000192928 922 ntBASIC14.47□□□□□ -0.09
Cbx3P23198 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cbx3P23198 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.47□□□□□ -0.09
Cbx3P23198 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.47□□□□□ -0.09
Cbx3P23198 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cbx3P23198 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cbx3P23198 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cbx3P23198 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cbx3P23198 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cbx3P23198 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms