Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.97■□□□□ 0.47
Kcna1P16388 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Kcna1P16388 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.96■□□□□ 0.47
Kcna1P16388 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.96■□□□□ 0.47
Kcna1P16388 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Kcna1P16388 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Kcna1P16388 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.96■□□□□ 0.47
Kcna1P16388 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.96■□□□□ 0.47
Kcna1P16388 Gm27646-201ENSMUST00000183989 110 ntBASIC17.96■□□□□ 0.47
Kcna1P16388 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.96■□□□□ 0.47
Kcna1P16388 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Kcna1P16388 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Kcna1P16388 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.95■□□□□ 0.46
Kcna1P16388 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Kcna1P16388 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Kcna1P16388 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.95■□□□□ 0.46
Kcna1P16388 Gm10060-201ENSMUST00000212002 111 ntBASIC17.95■□□□□ 0.46
Kcna1P16388 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.95■□□□□ 0.46
Kcna1P16388 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Kcna1P16388 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Kcna1P16388 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcna1P16388 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.94■□□□□ 0.46
Kcna1P16388 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Kcna1P16388 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Kcna1P16388 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Kcna1P16388 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.94■□□□□ 0.46
Kcna1P16388 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcna1P16388 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.93■□□□□ 0.46
Kcna1P16388 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Kcna1P16388 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.93■□□□□ 0.46
Kcna1P16388 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.93■□□□□ 0.46
Kcna1P16388 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.93■□□□□ 0.46
Kcna1P16388 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.93■□□□□ 0.46
Kcna1P16388 Mir5131-201ENSMUST00000175426 93 ntBASIC17.93■□□□□ 0.46
Kcna1P16388 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Kcna1P16388 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Kcna1P16388 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Kcna1P16388 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.93■□□□□ 0.46
Kcna1P16388 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Kcna1P16388 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcna1P16388 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms