Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.67■□□□□ 0.26
Cd44P15379 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd44P15379 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cd44P15379 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.66■□□□□ 0.26
Cd44P15379 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.66■□□□□ 0.26
Cd44P15379 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.66■□□□□ 0.26
Cd44P15379 Gm22697-201ENSMUST00000175194 63 ntBASIC16.66■□□□□ 0.26
Cd44P15379 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.66■□□□□ 0.26
Cd44P15379 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd44P15379 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cd44P15379 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.65■□□□□ 0.26
Cd44P15379 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cd44P15379 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.65■□□□□ 0.26
Cd44P15379 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.65■□□□□ 0.26
Cd44P15379 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.65■□□□□ 0.26
Cd44P15379 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd44P15379 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cd44P15379 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Cd44P15379 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.64■□□□□ 0.25
Cd44P15379 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Gm11355-201ENSMUST00000121120 306 ntBASIC16.64■□□□□ 0.25
Cd44P15379 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.64■□□□□ 0.25
Cd44P15379 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.64■□□□□ 0.25
Cd44P15379 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cd44P15379 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.64■□□□□ 0.25
Cd44P15379 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cd44P15379 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cd44P15379 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd44P15379 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.63■□□□□ 0.25
Cd44P15379 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Mir770-201ENSMUST00000103252 94 ntBASIC16.63■□□□□ 0.25
Cd44P15379 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.63■□□□□ 0.25
Cd44P15379 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.63■□□□□ 0.25
Cd44P15379 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cd44P15379 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.63■□□□□ 0.25
Cd44P15379 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.63■□□□□ 0.25
Cd44P15379 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.63■□□□□ 0.25
Cd44P15379 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.63■□□□□ 0.25
Cd44P15379 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cd44P15379 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cd44P15379 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.63■□□□□ 0.25
Cd44P15379 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cd44P15379 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd44P15379 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cd44P15379 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cd44P15379 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms