Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rb1P13405 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.19■□□□□ 0.18
Rb1P13405 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.19■□□□□ 0.18
Rb1P13405 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rb1P13405 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.19■□□□□ 0.18
Rb1P13405 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.19■□□□□ 0.18
Rb1P13405 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.19■□□□□ 0.18
Rb1P13405 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rb1P13405 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Gm1401-201ENSMUST00000122048 772 ntBASIC16.19■□□□□ 0.18
Rb1P13405 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.19■□□□□ 0.18
Rb1P13405 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Rb1P13405 Gm44430-201ENSMUST00000203376 995 ntBASIC16.19■□□□□ 0.18
Rb1P13405 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.19■□□□□ 0.18
Rb1P13405 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.19■□□□□ 0.18
Rb1P13405 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.19■□□□□ 0.18
Rb1P13405 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rb1P13405 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Rb1P13405 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rb1P13405 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.18■□□□□ 0.18
Rb1P13405 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rb1P13405 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rb1P13405 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.17■□□□□ 0.18
Rb1P13405 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rb1P13405 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rb1P13405 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rb1P13405 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.17■□□□□ 0.18
Rb1P13405 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.17■□□□□ 0.18
Rb1P13405 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.17■□□□□ 0.18
Rb1P13405 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.17■□□□□ 0.18
Rb1P13405 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.17■□□□□ 0.18
Rb1P13405 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rb1P13405 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms