Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccl3P10855 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccl3P10855 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccl3P10855 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccl3P10855 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.96□□□□□ -0.17
Ccl3P10855 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccl3P10855 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Ccl3P10855 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccl3P10855 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Ccl3P10855 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccl3P10855 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccl3P10855 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccl3P10855 Gm44872-201ENSMUST00000207864 420 ntBASIC13.96□□□□□ -0.17
Ccl3P10855 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccl3P10855 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.96□□□□□ -0.17
Ccl3P10855 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ccl3P10855 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl3P10855 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl3P10855 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl3P10855 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl3P10855 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl3P10855 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl3P10855 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Ccl3P10855 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccl3P10855 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccl3P10855 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Ccl3P10855 Gm5177-201ENSMUST00000183092 997 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 Gm45747-201ENSMUST00000212203 999 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.95□□□□□ -0.18
Ccl3P10855 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccl3P10855 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccl3P10855 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl3P10855 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl3P10855 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccl3P10855 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ccl3P10855 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ccl3P10855 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.94□□□□□ -0.18
Ccl3P10855 Gm14057-201ENSMUST00000120631 482 ntBASIC13.94□□□□□ -0.18
Ccl3P10855 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.94□□□□□ -0.18
Ccl3P10855 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccl3P10855 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.94□□□□□ -0.18
Ccl3P10855 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ccl3P10855 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ccl3P10855 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl3P10855 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccl3P10855 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Ccl3P10855 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms