Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Gm11336-201ENSMUST00000118168 334 ntBASIC13.82□□□□□ -0.2
UbbP0CG49 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.82□□□□□ -0.2
UbbP0CG49 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.82□□□□□ -0.2
UbbP0CG49 Gm7370-201ENSMUST00000219471 767 ntBASIC13.82□□□□□ -0.2
UbbP0CG49 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.82□□□□□ -0.2
UbbP0CG49 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.82□□□□□ -0.2
UbbP0CG49 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.82□□□□□ -0.2
UbbP0CG49 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UbbP0CG49 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.82□□□□□ -0.2
UbbP0CG49 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
UbbP0CG49 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Gm2274-201ENSMUST00000184539 609 ntBASIC13.81□□□□□ -0.2
UbbP0CG49 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UbbP0CG49 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.81□□□□□ -0.2
UbbP0CG49 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UbbP0CG49 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UbbP0CG49 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UbbP0CG49 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UbbP0CG49 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UbbP0CG49 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.8□□□□□ -0.2
UbbP0CG49 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.8□□□□□ -0.2
UbbP0CG49 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
UbbP0CG49 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UbbP0CG49 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.8□□□□□ -0.2
UbbP0CG49 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
UbbP0CG49 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.8□□□□□ -0.2
UbbP0CG49 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.8□□□□□ -0.2
UbbP0CG49 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UbbP0CG49 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UbbP0CG49 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
UbbP0CG49 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UbbP0CG49 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
UbbP0CG49 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UbbP0CG49 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UbbP0CG49 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms