Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hoxc9P09633 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Gm13365-201ENSMUST00000121188 973 ntBASIC20.46■□□□□ 0.87
Hoxc9P09633 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hoxc9P09633 Gm20553-201ENSMUST00000204205 844 ntBASIC20.46■□□□□ 0.87
Hoxc9P09633 Thap2-203ENSMUST00000218989 527 ntBASIC20.46■□□□□ 0.87
Hoxc9P09633 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hoxc9P09633 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxc9P09633 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hoxc9P09633 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.45■□□□□ 0.86
Hoxc9P09633 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.45■□□□□ 0.86
Hoxc9P09633 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Hoxc9P09633 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Hoxc9P09633 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hoxc9P09633 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc9P09633 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.44■□□□□ 0.86
Hoxc9P09633 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hoxc9P09633 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.44■□□□□ 0.86
Hoxc9P09633 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc9P09633 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hoxc9P09633 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hoxc9P09633 Gm11745-201ENSMUST00000121669 448 ntBASIC20.43■□□□□ 0.86
Hoxc9P09633 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.43■□□□□ 0.86
Hoxc9P09633 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.43■□□□□ 0.86
Hoxc9P09633 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
Hoxc9P09633 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.43■□□□□ 0.86
Hoxc9P09633 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hoxc9P09633 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc9P09633 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Hoxc9P09633 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.42■□□□□ 0.86
Hoxc9P09633 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Gm44335-201ENSMUST00000196879 141 ntBASIC20.42■□□□□ 0.86
Hoxc9P09633 Gm44297-201ENSMUST00000198304 141 ntBASIC20.42■□□□□ 0.86
Hoxc9P09633 Gm44346-201ENSMUST00000198851 141 ntBASIC20.42■□□□□ 0.86
Hoxc9P09633 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hoxc9P09633 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc9P09633 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc9P09633 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms