Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm12441-201ENSMUST00000121806 588 ntBASIC11.62□□□□□ -0.55
TcraP01849 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.62□□□□□ -0.55
TcraP01849 Gm27275-201ENSMUST00000184318 272 ntBASIC11.62□□□□□ -0.55
TcraP01849 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TcraP01849 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
TcraP01849 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TcraP01849 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
TcraP01849 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TcraP01849 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.61□□□□□ -0.55
TcraP01849 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TcraP01849 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TcraP01849 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TcraP01849 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
TcraP01849 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TcraP01849 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.61□□□□□ -0.55
TcraP01849 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TcraP01849 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.61□□□□□ -0.55
TcraP01849 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
TcraP01849 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.6□□□□□ -0.55
TcraP01849 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.6□□□□□ -0.55
TcraP01849 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.6□□□□□ -0.55
TcraP01849 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.6□□□□□ -0.55
TcraP01849 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.6□□□□□ -0.55
TcraP01849 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Gm12382-201ENSMUST00000122005 922 ntBASIC11.6□□□□□ -0.55
TcraP01849 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.6□□□□□ -0.55
TcraP01849 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.6□□□□□ -0.55
TcraP01849 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TcraP01849 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
TcraP01849 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TcraP01849 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
TcraP01849 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.59□□□□□ -0.55
TcraP01849 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Trmt13-210ENSMUST00000198454 880 ntBASIC11.59□□□□□ -0.55
TcraP01849 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TcraP01849 Gm20049-201ENSMUST00000219950 730 ntBASIC11.59□□□□□ -0.55
TcraP01849 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms