Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.71□□□□□ -0.21
Igh-VJ558P01758 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.71□□□□□ -0.22
Igh-VJ558P01758 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igh-VJ558P01758 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.71□□□□□ -0.22
Igh-VJ558P01758 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igh-VJ558P01758 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Gm7284-201ENSMUST00000131667 944 ntBASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igh-VJ558P01758 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm27357-201ENSMUST00000183754 135 ntBASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igh-VJ558P01758 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.68□□□□□ -0.22
Igh-VJ558P01758 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms