Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.24■□□□□ 0.35
P01734 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.24■□□□□ 0.35
P01734 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.23■□□□□ 0.35
P01734 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.23■□□□□ 0.35
P01734 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
P01734 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P01734 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.23■□□□□ 0.35
P01734 Gm6257-201ENSMUST00000163864 910 ntBASIC17.23■□□□□ 0.35
P01734 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.23■□□□□ 0.35
P01734 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.23■□□□□ 0.35
P01734 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01734 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
P01734 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.22■□□□□ 0.35
P01734 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Gm11780-201ENSMUST00000136880 516 ntBASIC17.22■□□□□ 0.35
P01734 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.22■□□□□ 0.35
P01734 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
P01734 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P01734 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
P01734 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01734 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
P01734 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.21■□□□□ 0.35
P01734 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Gm25990-201ENSMUST00000102440 86 ntBASIC17.21■□□□□ 0.35
P01734 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.21■□□□□ 0.35
P01734 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P01734 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01734 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01734 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01734 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
P01734 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P01734 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.2■□□□□ 0.34
P01734 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.2■□□□□ 0.34
P01734 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P01734 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P01734 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.2■□□□□ 0.34
P01734 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01734 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms