Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ifna1P01572 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ifna1P01572 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.41□□□□□ -0.26
Ifna1P01572 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ifna1P01572 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ifna1P01572 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ifna1P01572 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.4□□□□□ -0.26
Ifna1P01572 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.4□□□□□ -0.26
Ifna1P01572 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.4□□□□□ -0.26
Ifna1P01572 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ifna1P01572 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.39□□□□□ -0.27
Ifna1P01572 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.39□□□□□ -0.27
Ifna1P01572 Gm29707-201ENSMUST00000196325 491 ntBASIC13.39□□□□□ -0.27
Ifna1P01572 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.39□□□□□ -0.27
Ifna1P01572 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ifna1P01572 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Ifna1P01572 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.39□□□□□ -0.27
Ifna1P01572 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ifna1P01572 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ifna1P01572 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ifna1P01572 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.38□□□□□ -0.27
Ifna1P01572 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ifna1P01572 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ifna1P01572 Gm715-201ENSMUST00000117865 831 ntBASIC13.38□□□□□ -0.27
Ifna1P01572 Gm11336-201ENSMUST00000118168 334 ntBASIC13.38□□□□□ -0.27
Ifna1P01572 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.38□□□□□ -0.27
Ifna1P01572 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ifna1P01572 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ifna1P01572 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms