Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DhfrP00375 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.36□□□□□ -0.11
DhfrP00375 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DhfrP00375 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DhfrP00375 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DhfrP00375 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.35□□□□□ -0.11
DhfrP00375 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DhfrP00375 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.35□□□□□ -0.11
DhfrP00375 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
DhfrP00375 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DhfrP00375 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DhfrP00375 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.34□□□□□ -0.11
DhfrP00375 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DhfrP00375 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.34□□□□□ -0.11
DhfrP00375 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.34□□□□□ -0.11
DhfrP00375 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.34□□□□□ -0.11
DhfrP00375 Mir5130-201ENSMUST00000175160 84 ntBASIC14.34□□□□□ -0.11
DhfrP00375 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
DhfrP00375 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DhfrP00375 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
DhfrP00375 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.34□□□□□ -0.11
DhfrP00375 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DhfrP00375 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DhfrP00375 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DhfrP00375 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
DhfrP00375 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DhfrP00375 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.33□□□□□ -0.11
DhfrP00375 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.33□□□□□ -0.12
DhfrP00375 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DhfrP00375 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
DhfrP00375 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.33□□□□□ -0.12
DhfrP00375 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
DhfrP00375 Gm7889-201ENSMUST00000185591 958 ntBASIC14.33□□□□□ -0.12
DhfrP00375 Gm45058-201ENSMUST00000205810 766 ntBASIC14.33□□□□□ -0.12
DhfrP00375 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.33□□□□□ -0.12
DhfrP00375 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.33□□□□□ -0.12
DhfrP00375 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DhfrP00375 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
DhfrP00375 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.32□□□□□ -0.12
DhfrP00375 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.32□□□□□ -0.12
DhfrP00375 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DhfrP00375 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DhfrP00375 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DhfrP00375 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DhfrP00375 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DhfrP00375 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.32□□□□□ -0.12
DhfrP00375 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms