Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.35□□□□□ -0.11
Abcd4O89016 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Abcd4O89016 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Abcd4O89016 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Abcd4O89016 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.34□□□□□ -0.11
Abcd4O89016 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.34□□□□□ -0.11
Abcd4O89016 Gm43514-201ENSMUST00000198852 424 ntBASIC14.34□□□□□ -0.11
Abcd4O89016 Gm6443-201ENSMUST00000203599 874 ntBASIC14.34□□□□□ -0.11
Abcd4O89016 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.34□□□□□ -0.11
Abcd4O89016 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Abcd4O89016 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.34□□□□□ -0.11
Abcd4O89016 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Abcd4O89016 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.34□□□□□ -0.11
Abcd4O89016 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.34□□□□□ -0.11
Abcd4O89016 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcd4O89016 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcd4O89016 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcd4O89016 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcd4O89016 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcd4O89016 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcd4O89016 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Abcd4O89016 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.33□□□□□ -0.12
Abcd4O89016 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.33□□□□□ -0.12
Abcd4O89016 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.33□□□□□ -0.12
Abcd4O89016 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.33□□□□□ -0.12
Abcd4O89016 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcd4O89016 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abcd4O89016 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Abcd4O89016 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.32□□□□□ -0.12
Abcd4O89016 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Abcd4O89016 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.32□□□□□ -0.12
Abcd4O89016 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Gm6376-201ENSMUST00000209407 580 ntBASIC14.32□□□□□ -0.12
Abcd4O89016 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.32□□□□□ -0.12
Abcd4O89016 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.32□□□□□ -0.12
Abcd4O89016 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Abcd4O89016 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcd4O89016 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms