Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Gm11355-201ENSMUST00000121120 306 ntBASIC11.26□□□□□ -0.61
Sh2d1aO88890 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.25□□□□□ -0.61
Sh2d1aO88890 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.25□□□□□ -0.61
Sh2d1aO88890 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.25□□□□□ -0.61
Sh2d1aO88890 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.25□□□□□ -0.61
Sh2d1aO88890 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh2d1aO88890 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.24□□□□□ -0.61
Sh2d1aO88890 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm18032-201ENSMUST00000222541 538 ntBASIC11.24□□□□□ -0.61
Sh2d1aO88890 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.24□□□□□ -0.61
Sh2d1aO88890 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms