Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.59■□□□□ 0.89
Apaf1O88879 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Apaf1O88879 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Apaf1O88879 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Apaf1O88879 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Apaf1O88879 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Apaf1O88879 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Gm15173-201ENSMUST00000122049 433 ntBASIC20.58■□□□□ 0.89
Apaf1O88879 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.58■□□□□ 0.89
Apaf1O88879 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Apaf1O88879 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.58■□□□□ 0.89
Apaf1O88879 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Gm2651-201ENSMUST00000203560 838 ntBASIC20.58■□□□□ 0.89
Apaf1O88879 Gm44771-201ENSMUST00000206975 626 ntBASIC20.58■□□□□ 0.89
Apaf1O88879 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Apaf1O88879 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Apaf1O88879 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Apaf1O88879 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Apaf1O88879 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.58■□□□□ 0.88
Apaf1O88879 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.58■□□□□ 0.88
Apaf1O88879 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Apaf1O88879 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Apaf1O88879 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Gm7230-201ENSMUST00000173026 815 ntBASIC20.57■□□□□ 0.88
Apaf1O88879 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.57■□□□□ 0.88
Apaf1O88879 Gm18195-201ENSMUST00000207604 706 ntBASIC20.57■□□□□ 0.88
Apaf1O88879 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.57■□□□□ 0.88
Apaf1O88879 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.57■□□□□ 0.88
Apaf1O88879 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.57■□□□□ 0.88
Apaf1O88879 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Apaf1O88879 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.56■□□□□ 0.88
Apaf1O88879 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.56■□□□□ 0.88
Apaf1O88879 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Apaf1O88879 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.56■□□□□ 0.88
Apaf1O88879 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apaf1O88879 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.55■□□□□ 0.88
Apaf1O88879 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Apaf1O88879 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Apaf1O88879 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apaf1O88879 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Apaf1O88879 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apaf1O88879 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms