Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.9■□□□□ 0.94
Tom1O88746 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC20.9■□□□□ 0.94
Tom1O88746 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC20.9■□□□□ 0.94
Tom1O88746 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.9■□□□□ 0.94
Tom1O88746 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC20.9■□□□□ 0.94
Tom1O88746 AY702102-202ENSMUST00000194651 1173 ntBASIC20.9■□□□□ 0.94
Tom1O88746 Gm18018-201ENSMUST00000198273 408 ntBASIC20.9■□□□□ 0.94
Tom1O88746 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC20.9■□□□□ 0.94
Tom1O88746 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.9■□□□□ 0.94
Tom1O88746 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tom1O88746 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.9■□□□□ 0.94
Tom1O88746 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Tom1O88746 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tom1O88746 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.89■□□□□ 0.93
Tom1O88746 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC20.89■□□□□ 0.93
Tom1O88746 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tom1O88746 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tom1O88746 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tom1O88746 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tom1O88746 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tom1O88746 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Gm9115-201ENSMUST00000120192 1348 ntBASIC20.88■□□□□ 0.93
Tom1O88746 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Gm12091-201ENSMUST00000146791 830 ntBASIC20.88■□□□□ 0.93
Tom1O88746 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.88■□□□□ 0.93
Tom1O88746 Gm44344-201ENSMUST00000200287 129 ntBASIC20.88■□□□□ 0.93
Tom1O88746 Gm18049-201ENSMUST00000208909 581 ntBASIC20.88■□□□□ 0.93
Tom1O88746 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC20.88■□□□□ 0.93
Tom1O88746 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.88■□□□□ 0.93
Tom1O88746 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tom1O88746 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tom1O88746 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Tom1O88746 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
Tom1O88746 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tom1O88746 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tom1O88746 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC20.87■□□□□ 0.93
Tom1O88746 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.87■□□□□ 0.93
Tom1O88746 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tom1O88746 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tom1O88746 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Tom1O88746 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC20.86■□□□□ 0.93
Tom1O88746 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC20.86■□□□□ 0.93
Tom1O88746 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tom1O88746 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.85■□□□□ 0.93
Tom1O88746 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tom1O88746 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.85■□□□□ 0.93
Tom1O88746 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.85■□□□□ 0.93
Tom1O88746 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC20.85■□□□□ 0.93
Tom1O88746 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tom1O88746 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tom1O88746 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms