Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hcn1O88704 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Hcn1O88704 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.22■□□□□ 0.03
Hcn1O88704 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcn1O88704 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.22■□□□□ 0.03
Hcn1O88704 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Hcn1O88704 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.21■□□□□ 0.03
Hcn1O88704 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.21■□□□□ 0.03
Hcn1O88704 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hcn1O88704 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.21■□□□□ 0.03
Hcn1O88704 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Gm10819-201ENSMUST00000099988 561 ntBASIC15.21■□□□□ 0.03
Hcn1O88704 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hcn1O88704 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.21■□□□□ 0.03
Hcn1O88704 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcn1O88704 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.21■□□□□ 0.02
Hcn1O88704 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcn1O88704 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcn1O88704 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcn1O88704 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hcn1O88704 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.2■□□□□ 0.02
Hcn1O88704 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Hcn1O88704 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcn1O88704 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.2■□□□□ 0.02
Hcn1O88704 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcn1O88704 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcn1O88704 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hcn1O88704 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.19■□□□□ 0.02
Hcn1O88704 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcn1O88704 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Hcn1O88704 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hcn1O88704 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Hcn1O88704 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.18■□□□□ 0.02
Hcn1O88704 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.18■□□□□ 0.02
Hcn1O88704 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hcn1O88704 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms