Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm27011-201ENSMUST00000182352 972 ntBASIC14.68□□□□□ -0.06
Cops4O88544 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.68□□□□□ -0.06
Cops4O88544 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.68□□□□□ -0.06
Cops4O88544 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops4O88544 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cops4O88544 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.68□□□□□ -0.06
Cops4O88544 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops4O88544 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cops4O88544 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cops4O88544 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cops4O88544 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.67□□□□□ -0.06
Cops4O88544 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.67□□□□□ -0.06
Cops4O88544 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cops4O88544 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.67□□□□□ -0.06
Cops4O88544 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.67□□□□□ -0.06
Cops4O88544 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.67□□□□□ -0.06
Cops4O88544 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Cops4O88544 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops4O88544 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cops4O88544 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.66□□□□□ -0.06
Cops4O88544 Gm3375-201ENSMUST00000203929 796 ntBASIC14.66□□□□□ -0.06
Cops4O88544 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.66□□□□□ -0.06
Cops4O88544 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cops4O88544 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cops4O88544 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.66□□□□□ -0.06
Cops4O88544 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cops4O88544 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cops4O88544 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Cops4O88544 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cops4O88544 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops4O88544 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cops4O88544 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Cops4O88544 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.65□□□□□ -0.06
Cops4O88544 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.65□□□□□ -0.06
Cops4O88544 Gm27463-201ENSMUST00000183569 57 ntBASIC14.65□□□□□ -0.06
Cops4O88544 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.65□□□□□ -0.06
Cops4O88544 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cops4O88544 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cops4O88544 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.65□□□□□ -0.06
Cops4O88544 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops4O88544 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms