Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Shoc2O88520 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.41■□□□□ 0.22
Shoc2O88520 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.41■□□□□ 0.22
Shoc2O88520 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shoc2O88520 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.4■□□□□ 0.22
Shoc2O88520 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Shoc2O88520 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shoc2O88520 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.4■□□□□ 0.22
Shoc2O88520 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Shoc2O88520 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Shoc2O88520 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shoc2O88520 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.4■□□□□ 0.22
Shoc2O88520 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shoc2O88520 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Shoc2O88520 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.39■□□□□ 0.21
Shoc2O88520 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shoc2O88520 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.39■□□□□ 0.21
Shoc2O88520 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.39■□□□□ 0.21
Shoc2O88520 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Shoc2O88520 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shoc2O88520 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Shoc2O88520 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Shoc2O88520 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Shoc2O88520 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.38■□□□□ 0.21
Shoc2O88520 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Shoc2O88520 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.38■□□□□ 0.21
Shoc2O88520 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Shoc2O88520 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Shoc2O88520 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Shoc2O88520 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Shoc2O88520 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shoc2O88520 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.37■□□□□ 0.21
Shoc2O88520 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.37■□□□□ 0.21
Shoc2O88520 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.37■□□□□ 0.21
Shoc2O88520 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shoc2O88520 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms