Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tgfbr3O88393 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.04■□□□□ -0
Tgfbr3O88393 Gm7787-201ENSMUST00000216858 688 ntBASIC15.04■□□□□ -0
Tgfbr3O88393 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tgfbr3O88393 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.04■□□□□ -0
Tgfbr3O88393 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Tgfbr3O88393 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.03■□□□□ -0
Tgfbr3O88393 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tgfbr3O88393 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.03■□□□□ -0
Tgfbr3O88393 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.03■□□□□ -0
Tgfbr3O88393 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Gm9682-201ENSMUST00000197505 556 ntBASIC15.03■□□□□ -0
Tgfbr3O88393 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.03■□□□□ -0
Tgfbr3O88393 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.03■□□□□ -0
Tgfbr3O88393 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.03■□□□□ -0
Tgfbr3O88393 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tgfbr3O88393 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tgfbr3O88393 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.03■□□□□ -0
Tgfbr3O88393 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tgfbr3O88393 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tgfbr3O88393 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tgfbr3O88393 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Tgfbr3O88393 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.02■□□□□ -0
Tgfbr3O88393 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tgfbr3O88393 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tgfbr3O88393 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tgfbr3O88393 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tgfbr3O88393 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Tgfbr3O88393 Gm13597-201ENSMUST00000121239 375 ntBASIC15.02■□□□□ -0
Tgfbr3O88393 Gm11025-201ENSMUST00000140773 466 ntBASIC15.02■□□□□ -0
Tgfbr3O88393 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.02■□□□□ -0
Tgfbr3O88393 Gm17968-201ENSMUST00000194902 784 ntBASIC15.02■□□□□ -0
Tgfbr3O88393 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.02■□□□□ -0
Tgfbr3O88393 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.02■□□□□ -0
Tgfbr3O88393 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tgfbr3O88393 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Tgfbr3O88393 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.02■□□□□ -0
Tgfbr3O88393 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tgfbr3O88393 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.01□□□□□ -0.01
Tgfbr3O88393 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.01□□□□□ -0.01
Tgfbr3O88393 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.01□□□□□ -0.01
Tgfbr3O88393 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.01□□□□□ -0.01
Tgfbr3O88393 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tgfbr3O88393 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tgfbr3O88393 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms