Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Itgb5O70309 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Itgb5O70309 Gm12260-201ENSMUST00000122447 411 ntBASIC17.54■□□□□ 0.4
Itgb5O70309 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.54■□□□□ 0.4
Itgb5O70309 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Gm5264-201ENSMUST00000190584 848 ntBASIC17.54■□□□□ 0.4
Itgb5O70309 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.54■□□□□ 0.4
Itgb5O70309 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Itgb5O70309 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.54■□□□□ 0.4
Itgb5O70309 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Itgb5O70309 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.53■□□□□ 0.4
Itgb5O70309 Gm15467-201ENSMUST00000120582 445 ntBASIC17.53■□□□□ 0.4
Itgb5O70309 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Gm9727-201ENSMUST00000161387 555 ntBASIC17.53■□□□□ 0.4
Itgb5O70309 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.53■□□□□ 0.4
Itgb5O70309 Gm4899-201ENSMUST00000178708 719 ntBASIC17.53■□□□□ 0.4
Itgb5O70309 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.53■□□□□ 0.4
Itgb5O70309 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Itgb5O70309 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Itgb5O70309 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.53■□□□□ 0.4
Itgb5O70309 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.52■□□□□ 0.4
Itgb5O70309 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.52■□□□□ 0.4
Itgb5O70309 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Itgb5O70309 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Itgb5O70309 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.52■□□□□ 0.4
Itgb5O70309 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.52■□□□□ 0.4
Itgb5O70309 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Itgb5O70309 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Itgb5O70309 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Itgb5O70309 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.51■□□□□ 0.39
Itgb5O70309 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Itgb5O70309 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Gm11594-201ENSMUST00000122313 162 ntBASIC17.51■□□□□ 0.39
Itgb5O70309 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.51■□□□□ 0.39
Itgb5O70309 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.51■□□□□ 0.39
Itgb5O70309 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Itgb5O70309 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Itgb5O70309 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms