Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.41□□□□□ -0.1
Pdlim3O70209 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Gm7213-201ENSMUST00000215977 950 ntBASIC14.41□□□□□ -0.1
Pdlim3O70209 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Gm2274-201ENSMUST00000184539 609 ntBASIC14.4□□□□□ -0.1
Pdlim3O70209 Gm8520-201ENSMUST00000186517 868 ntBASIC14.4□□□□□ -0.1
Pdlim3O70209 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim3O70209 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim3O70209 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim3O70209 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim3O70209 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim3O70209 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.39□□□□□ -0.11
Pdlim3O70209 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim3O70209 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Pdlim3O70209 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Pdlim3O70209 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim3O70209 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim3O70209 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Pdlim3O70209 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pdlim3O70209 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.38□□□□□ -0.11
Pdlim3O70209 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.38□□□□□ -0.11
Pdlim3O70209 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.38□□□□□ -0.11
Pdlim3O70209 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms