Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Gm11779-201ENSMUST00000118541 368 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Gm15358-201ENSMUST00000119249 520 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Gm19164-201ENSMUST00000210667 640 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl13O55038 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.38□□□□□ -0.27
Cxcl13O55038 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl13O55038 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm15467-201ENSMUST00000120582 445 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm12260-201ENSMUST00000122447 411 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm5682-201ENSMUST00000173402 505 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm37153-201ENSMUST00000193637 231 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.37□□□□□ -0.27
Cxcl13O55038 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.37□□□□□ -0.27
Cxcl13O55038 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl13O55038 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cxcl13O55038 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.36□□□□□ -0.27
Cxcl13O55038 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.36□□□□□ -0.27
Cxcl13O55038 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.36□□□□□ -0.27
Cxcl13O55038 Gm5264-201ENSMUST00000190584 848 ntBASIC13.36□□□□□ -0.27
Cxcl13O55038 Gm37935-201ENSMUST00000192012 982 ntBASIC13.36□□□□□ -0.27
Cxcl13O55038 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms