Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Mir6404-201ENSMUST00000183699 94 ntBASIC14.9□□□□□ -0.02
Cx3cl1O35188 Gm27867-201ENSMUST00000184778 125 ntBASIC14.9□□□□□ -0.02
Cx3cl1O35188 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.9□□□□□ -0.02
Cx3cl1O35188 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cx3cl1O35188 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.89□□□□□ -0.03
Cx3cl1O35188 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Dancr-204ENSMUST00000132389 2347 ntBASIC14.89□□□□□ -0.03
Cx3cl1O35188 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cx3cl1O35188 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Cx3cl1O35188 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.88□□□□□ -0.03
Cx3cl1O35188 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cx3cl1O35188 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Gm12644-201ENSMUST00000119935 606 ntBASIC14.87□□□□□ -0.03
Cx3cl1O35188 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.87□□□□□ -0.03
Cx3cl1O35188 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cx3cl1O35188 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms