Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Hdac1O09106 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.87■□□□□ 0.61
Hdac1O09106 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.87■□□□□ 0.61
Hdac1O09106 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Hdac1O09106 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.87■□□□□ 0.61
Hdac1O09106 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hdac1O09106 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.87■□□□□ 0.61
Hdac1O09106 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hdac1O09106 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac1O09106 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac1O09106 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.86■□□□□ 0.61
Hdac1O09106 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hdac1O09106 Gm43799-201ENSMUST00000201845 579 ntBASIC18.86■□□□□ 0.61
Hdac1O09106 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac1O09106 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hdac1O09106 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hdac1O09106 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac1O09106 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hdac1O09106 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac1O09106 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac1O09106 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hdac1O09106 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.85■□□□□ 0.61
Hdac1O09106 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.85■□□□□ 0.61
Hdac1O09106 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.85■□□□□ 0.61
Hdac1O09106 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.85■□□□□ 0.61
Hdac1O09106 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hdac1O09106 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.85■□□□□ 0.61
Hdac1O09106 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hdac1O09106 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac1O09106 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hdac1O09106 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Gm11355-201ENSMUST00000121120 306 ntBASIC18.84■□□□□ 0.61
Hdac1O09106 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Hdac1O09106 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hdac1O09106 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hdac1O09106 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac1O09106 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.83■□□□□ 0.61
Hdac1O09106 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac1O09106 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac1O09106 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac1O09106 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Hdac1O09106 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac1O09106 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hdac1O09106 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hdac1O09106 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac1O09106 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hdac1O09106 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac1O09106 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac1O09106 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac1O09106 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.83■□□□□ 0.6
Hdac1O09106 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hdac1O09106 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac1O09106 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms