Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.5■□□□□ 0.39
Pcdh11xF6ZNL5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Gm44454-201ENSMUST00000198541 138 ntBASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Asic1-205ENSMUST00000228185 1818 ntBASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh11xF6ZNL5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh11xF6ZNL5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh11xF6ZNL5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh11xF6ZNL5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh11xF6ZNL5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms