Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpsf4lE9Q2N0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm8825-201ENSMUST00000182565 998 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm4518-201ENSMUST00000182638 718 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4lE9Q2N0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4lE9Q2N0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms