Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.35□□□□□ -0.11
Gm3543D3Z235 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3543D3Z235 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.34□□□□□ -0.11
Gm3543D3Z235 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3543D3Z235 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm3543D3Z235 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3543D3Z235 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.33□□□□□ -0.12
Gm3543D3Z235 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm3543D3Z235 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3543D3Z235 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Gm44454-201ENSMUST00000198541 138 ntBASIC14.32□□□□□ -0.12
Gm3543D3Z235 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm3543D3Z235 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3543D3Z235 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms