Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.17□□□□□ -0.14
Shank1D3YZU1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Gm5177-201ENSMUST00000183092 997 ntBASIC14.16□□□□□ -0.14
Shank1D3YZU1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Gm43125-201ENSMUST00000201724 730 ntBASIC14.16□□□□□ -0.14
Shank1D3YZU1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.16□□□□□ -0.14
Shank1D3YZU1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shank1D3YZU1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.15□□□□□ -0.14
Shank1D3YZU1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Gm8344-201ENSMUST00000119813 856 ntBASIC14.15□□□□□ -0.14
Shank1D3YZU1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.15□□□□□ -0.14
Shank1D3YZU1 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.15□□□□□ -0.14
Shank1D3YZU1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shank1D3YZU1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Shank1D3YZU1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.15□□□□□ -0.15
Shank1D3YZU1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Shank1D3YZU1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Gm15427-201ENSMUST00000117288 531 ntBASIC14.14□□□□□ -0.15
Shank1D3YZU1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.14□□□□□ -0.15
Shank1D3YZU1 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
Shank1D3YZU1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Gm45612-201ENSMUST00000211320 160 ntBASIC14.14□□□□□ -0.15
Shank1D3YZU1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms