Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Gm27463-201ENSMUST00000183569 57 ntBASIC13.35□□□□□ -0.27
BC048679D3YXE9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC048679D3YXE9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.34□□□□□ -0.27
BC048679D3YXE9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.34□□□□□ -0.27
BC048679D3YXE9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BC048679D3YXE9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.33□□□□□ -0.27
BC048679D3YXE9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
BC048679D3YXE9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
BC048679D3YXE9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
BC048679D3YXE9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.33□□□□□ -0.28
BC048679D3YXE9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
BC048679D3YXE9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Mir5122-201ENSMUST00000175004 89 ntBASIC13.32□□□□□ -0.28
BC048679D3YXE9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.32□□□□□ -0.28
BC048679D3YXE9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BC048679D3YXE9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms