Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h2aeC0HKE4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h2aeC0HKE4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Gm9013-201ENSMUST00000132939 882 ntBASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h2aeC0HKE4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h2aeC0HKE4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hist1h2aeC0HKE4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms