Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn7aB1AYL1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 AA543401-201ENSMUST00000164248 1269 ntBASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn7aB1AYL1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn7aB1AYL1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Gm10253-201ENSMUST00000194270 940 ntBASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn7aB1AYL1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn7aB1AYL1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn7aB1AYL1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn7aB1AYL1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Scn7aB1AYL1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn7aB1AYL1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Mir449b-201ENSMUST00000104833 80 ntBASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms