Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 BC037039-201ENSMUST00000192003 2205 ntBASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Gm18284-201ENSMUST00000172604 624 ntBASIC12.88□□□□□ -0.35
Gm12887B1AVM1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm12887B1AVM1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Gm13186-201ENSMUST00000118031 316 ntBASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Gm36967-201ENSMUST00000193814 266 ntBASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm12887B1AVM1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Gm7791-201ENSMUST00000219066 539 ntBASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm12887B1AVM1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Phf7-203ENSMUST00000226565 1971 ntBASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm12887B1AVM1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms